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Canek: Batch Correction of Single Cell Transcriptome Data
Non-linear/linear hybrid method for batch-effect correction that uses Mutual Nearest Neighbors (MNNs) to identify similar cells between datasets. Reference: Loza M. et al. (NAR Genomics and Bioinformatics, 2020) <<a href="https://doi.org/10.1093%2Fnargab%2Flqac022" target="_top">doi:10.1093/nargab/lqac022</a>>.
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Canek: Batch Correction of Single Cell Transcriptome Data
Non-linear/linear hybrid method for batch-effect correction that uses Mutual Nearest Neighbors (MNNs) to identify similar cells between datasets. Reference: Loza M. et al. (NAR Genomics and Bioinformatics, 2020) <<a href="https://doi.org/10.1093%2Fnargab%2Flqac022" target="_top">doi:10.1093/nargab/lqac022</a>>.
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Canek: Batch Correction of Single Cell Transcriptome Data
Non-linear/linear hybrid method for batch-effect correction that uses Mutual Nearest Neighbors (MNNs) to identify similar cells between datasets. Reference: Loza M. et al. (NAR Genomics and Bioinformatics, 2020) <<a href="https://doi.org/10.1093%2Fnargab%2Flqac022" target="_top">doi:10.1093/nargab/lqac022</a>>.
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10- titleCRAN: Package Canek
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- citation_titleBatch Correction of Single Cell Transcriptome Data [R package Canek version 0.2.5]
- citation_author1Martin Loza
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5- og:titleCanek: Batch Correction of Single Cell Transcriptome Data
- og:descriptionNon-linear/linear hybrid method for batch-effect correction that uses Mutual Nearest Neighbors (MNNs) to identify similar cells between datasets. Reference: Loza M. et al. (NAR Genomics and Bioinformatics, 2020) <<a href="https://doi.org/10.1093%2Fnargab%2Flqac022" target="_top">doi:10.1093/nargab/lqac022</a>>.
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- https://doi.org/10.1093%2Fnargab%2Flqac022
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- https://github.com/MartinLoza/Canek/issues