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https://github.com/genome/somatic-sniper/issues/5

VCF BCOUNT field is incorrect · Issue #5 · genome/somatic-sniper

See https://www.biostars.org/p/105827/ There are two bugs going on here. BCOUNT is being limited to only bases seen in called tumor and normal genotypes. The limitation in 1 is only being applied in a way that non-ACTG bases can count in...



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VCF BCOUNT field is incorrect · Issue #5 · genome/somatic-sniper

https://github.com/genome/somatic-sniper/issues/5

See https://www.biostars.org/p/105827/ There are two bugs going on here. BCOUNT is being limited to only bases seen in called tumor and normal genotypes. The limitation in 1 is only being applied in a way that non-ACTG bases can count in...



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https://github.com/genome/somatic-sniper/issues/5

VCF BCOUNT field is incorrect · Issue #5 · genome/somatic-sniper

See https://www.biostars.org/p/105827/ There are two bugs going on here. BCOUNT is being limited to only bases seen in called tumor and normal genotypes. The limitation in 1 is only being applied in a way that non-ACTG bases can count in...

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      See https://www.biostars.org/p/105827/ There are two bugs going on here. BCOUNT is being limited to only bases seen in called tumor and normal genotypes. The limitation in 1 is only being applied i...
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